The Effects of Copper and Salt-Induced Stress on the Rhizosphere of Avicenna marina and Rhizobacteria Community Structure: A gene high-throughput sequencing and metabolomics analysis
Introduction: The presence of rhizobacteria in soils protects plants against pathogens, promotes growth, decreases pollutant uptake, and increases soil fertility. However, the role of rhizobacteria in the mitigation of stress in the mangrove ecosystem remains elusive. Thus, this study investigates the effects of salinity and copper-induced stress on rhizobacterial community structure and growth of Avicennia marina in a 4-year semi-natural experimental setup.
Method: Pot experiments were set up to investigatethe growth of A. marina and changes in the rhizosphere bacterial community structure under salt and copper stress. The treatments included a salt stress group (S5Cu0, S15Cu0, and S25Cu0) and a copper stress group (S15Cu200, S15Cu400, and S25Cu400); where S5, S15, and S25 represent 5, 15, and 25‰ salt levels and Cu0, Cu200, and C400 represent 0, 200, and 400 mg L⁻¹ Cu, respectively.
Results and discussion: The results showed that dual stress in S25Cu400 significantly reduced the concentration of available Cu by 60.08% compared to S15Cu400, indicating that high salt concentration mitigated Cu bioavailability and possible toxicity to rhizobacteria and A. marina. It was observed that salt stress decreased the concentrations of L-glutamic acid and L-proline while copper stress decreased the concentrations of L-glutamate, L-proline, and p-coumaroylbutyramine. In S15Cu200 for example, the concentrations of L-glutamate, L-proline, and p-coumaroylbutyramine were significantly decreased to 72.19%, 90.44%, and 91.80%, respectively, while creatine was increased to 1.1005-fold of S15Cu0. This suggests that under salt and Cu stress, the rhizosphere microbial community maintained cellular integrity through osmoprotectants, intracellular homeostasis using metabolites such as proline, and improved intracellular utilization of organic N and energy through arginine biosynthesis with alanine, aspartate, and glutamate metabolism. The regulation of these metabolic pathways enhanced antioxidant defenses, nutrient recycling, accumulation of osmoprotectants, stability of plasma membrane, and chelation of Cu, thereby improving the stress tolerance of the microbial community and A. marina. Furthermore, the sequencing results revealed that the rhizobacterial community was changed significantly and dominated by Proteobacteria, Chloroflexi, Actinobacteriota, and Firmicutes, with the relative abundance varying between samples. Analyzing the rhizosphere soil in S25Cu400 revealed seven culturable novel bacteria strains identified as G21 (Pontibacillus sp.), G26 (Sphingomicrobium sp.), G29 (Jiella sp.), R5 (Acuticoccus sp.), R6 (Fulvimarina sp.), R9 (Fulvimarina sp.), and R10 (Jiella sp.), with 97.59%, 97.00%, 97.92%, 96.16%, 97.59%, and 98.25% similarity to the nearest related strains, respectively. These bacteria produced 14 secondary metabolites with the ability to inhibit the mobility of Aeromonas hydrophila and Pst pathogenic bacteria. Since the response mechanisms were unbalanced between treatments, it resulted in differential growth trends for A. marina in order of S15Cu200 > S15Cu0 > S25Cu0 > S5Cu0 > S25Cu400 > S15Cu400 after 4-y.Conclusion: Rhizobacteria in the rhizosphere of A. marina regulate soil processes to mitigate salt and heavy metal-induced stress and secrete secondary metabolites capable of inhibiting the activities of pathogenic microorganisms, thereby promoting the growth of A. marina.